Clinical Research
K-ras mutation detection using a novel amplification refractory mutation system-based quantitative polymerase chain reaction with locked nucleic acid blocker in plasma among colorectal cancer patients
Lishan Min, Zhaozheng Zheng, Fuchu Qian, Guiyang Zhang, Yingrong Chen, Jing Zhong, Zhihong Ma, Licheng Dai, Weiqin Jiang
Published 2017-11-08
Cite as Chin J Exp Surg, 2017, 34(11): 1974-1977. DOI: 10.3760/cma.j.issn.1001-9030.2017.11.051
Abstract
ObjectiveTo determine whether plasma circullating cell-free DNA (cfDNA) is a viable alternative approach for K-ras mutation testing in colorectal cancer (CRC) patients.
MethodsThe study included 155 CRC patients. An a novel amplification refractory mutation system-based quantitative polymerase chain reaction with locked nucleic acid (LNA-ARMS-PCR) was developed to assess the K-ras mutation in preoperative plasma and paired tumor tissues. Firstly intra-tumoral heterogeneity analysis was used to determine whether it was a robust mutation detection method for the detection of low-abundance K-ras mutations.
ResultsThe newly built LNA-ARMS-PCR was a robust mutation detection method to escape the most false negative caused by intra-tumoral heterogeneity. The positive consensus rate and negative consensus rate was 35.3% and 100.0%, between plasma and tumor tissue K-ras mutation detection, respectively. The majority of K-ras mutations detected in tumors were also found in plasma(15/18 (83.3%)) in patients of stage Ⅳ. The accordance of plasma and tumor mutation are strongly correlated to TNM stage and cfDNA level.
ConclusionK-ras analysis in plasma cfDNA is only a viable alternative to tissue analysis in mCRC (stage Ⅳ). Quantitative levels of cfDNA and plasma mutation positivity are strongly correlated.
Key words:
Colorectal cancer; K-ras; Locked nucleic acid; Amplification refractory mutation system
Contributor Information
Lishan Min
Huzhou Key Laboratory of Molecular Medicine, Huzhou Central Hospital, Huzhou 313000, China
Zhaozheng Zheng
Department of Colorectal Surgery, Huzhou Central Hospital, Huzhou 313000, China
Fuchu Qian
Huzhou Key Laboratory of Molecular Medicine, Huzhou Central Hospital, Huzhou 313000, China
Guiyang Zhang
Department of Colorectal Surgery, Huzhou Central Hospital, Huzhou 313000, China
Yingrong Chen
Huzhou Key Laboratory of Molecular Medicine, Huzhou Central Hospital, Huzhou 313000, China
Jing Zhong
Huzhou Key Laboratory of Molecular Medicine, Huzhou Central Hospital, Huzhou 313000, China
Zhihong Ma
Huzhou Key Laboratory of Molecular Medicine, Huzhou Central Hospital, Huzhou 313000, China
Licheng Dai
Huzhou Key Laboratory of Molecular Medicine, Huzhou Central Hospital, Huzhou 313000, China
Weiqin Jiang
Cancer Center, First Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou 310003, China