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ENGLISH ABSTRACT
群发7型腺病毒肺炎42例临床特点及基因组学分析
李小芳
席雯
王媛媛
王秀琴
赵娜
王海娟
吴涛
杨建昌
张国林
张立勇
赵佳丽
杨爱龙
宁元元
刘艳楠
平杰
高占成
童贻刚
田桂珍
作者及单位信息
·
DOI: 10.3760/cma.j.issn.1001-0939.2019.03.011
Clinical characteristics of human adenovirus type 7 pneumonia and genetic characteristics of human adenovirus type 7
Li Xiaofang
Xi Wen
Wang Yuanyuan
Wang Xiuqin
Zhao Na
Wang Haijuan
Wu Tao
Yang Jianchang
Zhang Guolin
Zhang Liyong
Zhao Jiali
Yang Ailong
Ning Yuanyuan
Liu Yannan
Ping Jie
Gao Zhancheng
Tong Yigang
Tian Guizhen
Authors Info & Affiliations
Li Xiaofang
Department of Respiration, Army General Hospital 263, Beijing 101149, China
Xi Wen
Department of Pulmonary and Critical Care Medicine, Peking University People′s Hospital, Beijing 100044, China
Wang Yuanyuan
Beijing Institute of Microbiology and Epidemiology, Beijing 100071, China
Wang Xiuqin
Department of Drug and Equipment, Army General Hospital 263, Beijing 101149, China
Zhao Na
Department of Respiration, Army General Hospital 263, Beijing 101149, China
Wang Haijuan
Department of Respiration, Army General Hospital 263, Beijing 101149, China
Wu Tao
Department of Respiration, Army General Hospital 263, Beijing 101149, China
Yang Jianchang
Department of Respiration, Army General Hospital 263, Beijing 101149, China
Zhang Guolin
Department of Respiration, Army General Hospital 263, Beijing 101149, China
Zhang Liyong
Department of Respiration, Army General Hospital 263, Beijing 101149, China
Zhao Jiali
Department of Respiration, Army General Hospital 263, Beijing 101149, China
Yang Ailong
Medical Affairs Division, Army General Hospital 263, Beijing 101149, China
Ning Yuanyuan
Department of Infection Control, Army General Hospital 263, Beijing 101149, China
Liu Yannan
Department of Pulmonary and Critical Care Medicine, Peking University People′s Hospital, Beijing 100044, China
Ping Jie
Hospital Affairs Division, Army General Hospital 263, Beijing 101149, China
Gao Zhancheng
Department of Pulmonary and Critical Care Medicine, Peking University People′s Hospital, Beijing 100044, China
Tong Yigang
Beijing Institute of Microbiology and Epidemiology, Beijing 100071, China
Tian Guizhen
Department of Respiration, Army General Hospital 263, Beijing 101149, China
·
DOI: 10.3760/cma.j.issn.1001-0939.2019.03.011
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摘要

目的探讨7型腺病毒肺炎患者的临床表现及7型腺病毒株(CHN/BeiJing/2018)的基因组学特征。

方法收集2017年10月27日至2018年2月28日北京某兵营群发性7型腺病毒肺炎病例42例,均为男性,年龄20~25岁,平均(21±2)岁。收集BALF并用试剂盒提取其中的腺病毒DNA,进行病毒全基因组测序,将所得序列与国内外已知流行株进行在线比对。应用Mega 6.0软件基于A~F腺病毒不同亚属全基因组绘制系统进化树并进行相关分析。

结果42例中38例表现为流感样症状,36例发热,41例咳嗽,38例咳痰,12例出现胸痛,5例合并化脓性扁桃体炎。4例出现一过性痰中带血,3例出现喘息,肺部体检无明显阳性体征,仅3例肺部可闻及湿性啰音;8例患者肌酸激酶明显升高(肌酸激酶>400 U/L),经治疗后均恢复正常。4例合并低氧血症,动脉血氧分压<80 mmHg(1mmHg=0.133 kPa),未出现呼吸衰竭和急性呼吸窘迫综合征病例。胸部影像学可见斑片状渗出或实变影,双肺各叶段均可受累,以肺下叶多见。10例合并流感病毒感染,32例合并非典型病原体感染。本次分离株基因组与国内外已知流行株(19BOVLB/Volg ograd/Rus/2014及0901HZ/ShX/CHN/2009)基因组覆盖率为100%,同源性为99%,基因片段无明显插入或缺失,未见关键位点碱基突变;进化分析提示该病毒株与2012年湖北荆门分离的7型腺病毒株亲缘关系最近。

结论7型腺病毒肺炎临床主要表现为轻型肺炎,呈自限性,对症治疗后多数患者预后良好。引起本次腺病毒肺炎的7型腺病毒流行株与其他国内外流行株基因组相比无明显突变,提示7型腺病毒可以在外界环境中长期存在,导致散发病例或在小范围内流行。

腺病毒科;肺炎;基因组学
ABSTRACT

ObjectiveTo better understand the clinical features of human adenovirus type 7 (hAdV7) pneumonia and to identify whether there is a variation in the genome of the strain (CHN/BeiJing/2018) isolated during the small-scale epidemic.

MethodForty-two patients were diagnosed with hAdV7 pneumonia between October 27th, 2017 and February 28th, 2018. They were all males with an average age of (21±2) years. Demographic and clinical data were reviewed and analyzed in detail. The nucleic acid of the epidemic strain was extracted from a bronchoalveolar lavage fluid sample. Whole genome sequencing (WGS) was then performed and sequences were compared with other hAdV7 strains distributed globally. Phylogenetic tree analysis was conducted based on whole genome sequences of the epidemic strain.

ResultsThirty-eight cases with hAdV7 pneumonia presented with influenza-like symptoms (90.5%) at the onset and 36 cases developed fever (85.7%), followed by cough (97.6%), expectoration (90.5%) and chest pain (28.6%). Five cases presented with tonsillitis(11.9%) and 4 had transient hemoptysis (9.5%), while 3 patients reported dyspnea (7.1%). Moist rales were only heard in 3 patients (7.1%). Notably elevated creatine kinase (CK) concentrations were observed in 8 patients (19.1%), but all returned to normal after treatment. Four cases developed hypoxemia (9.5%), but none of them progressed to respiratory failure or acute respiratory distress syndrome (ARDS). Chest CT imaging showed bilateral patchy parenchymal opacities with a random distribution with or without consolidation. Ten patients were co-infected with influenza virus (23.8%), while 32 patients developed atypical pneumonia (76.2%). Genomic analysis revealed that the strain isolated during this epidemic was 99% similar to the known hAdV7 strains (19BOVLB/Volgograd/Rus/2014 and 0901HZ/ShX/CHN/2009). Phylogenetic tree analysis suggested that the strain was closely related to the hAdV7 strain isolated in Jingmen China in 2012.

ConclusionsCases with hAdV7 pneumonia were generally mild. Symptomatic treatment was sufficient for a favorable prognosis. A good genome stability of the hAdV7 strain was observed, indicating that hAdV7 could remain stable for a long period and cause continuing sporadic cases and clusters.

Adenoviridae;Pneuropneumonia;Genomics
Gao Zhancheng, Email: mocdef.3ab616445gnehcnahzoag
Tong Yigang, Email: mocdef.labiamggnagiy.gnot
Tian Guizhen, Email: mocdef.uabhos555naitzg

Li Xiaofang, Xi Wen and Wang Yuanyuan are contributed equally to the article

引用本文

李小芳,席雯,王媛媛,等. 群发7型腺病毒肺炎42例临床特点及基因组学分析[J]. 中华结核和呼吸杂志,2019,42(3):206-212.

DOI:10.3760/cma.j.issn.1001-0939.2019.03.011

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自1953年至今 [ 1 , 2 ],已发现人类腺病毒(human adenovirus,hAdV)7组(A~G组)、55个血清型,是一种可引起呼吸道、消化道、泌尿道、眼部和心肌等多部位感染的病原体 [ 3 , 4 ]。自2011年12月以来,我国不同地区于冬春季节先后发生多起经呼吸道传播的暴发传染病疫情,疫情波及面广,传染性强,经实验室病原检测鉴定多为B组腺病毒,包括7型、14型和55型等 [ 5 , 6 , 7 ]。全球也多次报道由腺病毒引发的呼吸道疾病在新兵中暴发流行 [ 3 , 8 , 9 ]。绝大部分病例临床表现为发热、周身不适和咳嗽等流感样症状,有些病例表现为肺炎,个别病例发展为重症肺炎甚至死亡 [ 5 , 6 , 7 , 8 , 9 ]。现将2017年10月至2018年3月北京军区总医院二六三临床部收治的来自北京某兵营的聚集性7型腺病毒肺炎病例进行总结分析,以期提高临床医生对腺病毒肺炎的甄别及诊疗水平。
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备注信息
A
高占成,Email: mocdef.3ab616445gnehcnahzoag
B
童贻刚,Email: mocdef.labiamggnagiy.gnot
C
田桂珍,Email: mocdef.uabhos555naitzg
D

李小芳、席雯和王媛媛对本文有同等贡献

E
所有作者均声明不存在利益冲突
F
国家重点研发计划 (2016YFC0903800)
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