Chinese expert consensus on the application of metagenomic next-generation sequencing technology in the diagnosis of pathogens in hematological patients (2023)
Chinese Society of Hematology, Chinese Medical Association, Antimicrobial Infection Branch
Liu Qifa
Feng Sizhou
Authors Info & Affiliations
Chinese Society of Hematology, Chinese Medical Association, Antimicrobial Infection Branch
Liu Qifa
Department of Hematology, Nanfang Hospital, Southern Medical University, Clinical Medical Research Center of Hematological Diseases of Guangdong Province, Guangzhou 510515, China
Feng Sizhou
State Key Laboratory of Experimental Hematology, National Clinical Research Center for Blood Diseases, Haihe Laboratory of Cell Ecosystem, Institute of Hematology & Blood Diseases Hospital, Chinese Academy of Medical Sciences & Peking Union Medical College, Tianjin 300020, China
Baden LR , Swaminathan S , Angarone M , et al. Prevention and Treatment of Cancer-Related Infections, Version 2.2016, NCCN Clinical Practice Guidelines in Oncology[J]. J Natl Compr Canc Netw, 2016, 14(7): 882-913. DOI:
10.6004/jnccn.2016.0093
.
Averbuch D , Cordonnier C , Livermore DM , et al. Targeted therapy against multi-resistant bacteria in leukemic and hematopoietic stem cell transplant recipients: guidelines of the 4th European Conference on Infections in Leukemia (ECIL-4, 2011)[J]. Haematologica, 2013, 98(12):1836-1847. DOI:
10.3324/haematol.2013.091330
.
Xu C , Chen X , Zhu G , et al. Utility of plasma cell-free DNA next-generation sequencing for diagnosis of infectious diseases in patients with hematological disorders[J]. J Infect, 2023, 86(1):14-23. DOI:
10.1016/j.jinf.2022.11.020
.
Feng S , Rao G , Wei X , et al. Clinical metagenomic sequencing of plasma microbial cell-free DNA for febrile neutropenia in patients with acute leukaemia[J]. Clin Microbiol Infect, 2023,
10.1016/j.cmi.2023.05.034
. DOI: .
Zhang M , Wang Z , Wang J , et al. The Value of Metagenomic Next-Generation Sequencing in Hematological Malignancy Patients with Febrile Neutropenia After Empiric Antibiotic Treatment Failure[J]. Infect Drug Resist, 2022, 15:3549-3559. DOI:
10.2147/IDR.S364525
.
Li H , Ge T , Huang M , et al. Application of metagenomic next-generation sequencing in bloodstream infection regarding immunosuppression[J]. J Infect, 2023, 86(5):508-512. DOI:
10.1016/j.jinf.2023.02.008
.
Jing C , Chen H , Liang Y , et al. Clinical Evaluation of an Improved Metagenomic Next-Generation Sequencing Test for the Diagnosis of Bloodstream Infections[J]. Clin Chem, 2021, 67(8):1133-1143. DOI:
10.1093/clinchem/hvab061
.
Eichenberger EM , de Vries CR , Ruffin F , et al. Microbial Cell-Free DNA Identifies Etiology of Bloodstream Infections, Persists Longer Than Conventional Blood Cultures, and Its Duration of Detection Is Associated With Metastatic Infection in Patients With Staphylococcus aureus and Gram-Negative Bacteremia[J]. Clin Infect Dis, 2022, 74(11):2020-2027. DOI:
10.1093/cid/ciab742
.
Fontana L , Strasfeld L . Respiratory Virus Infections of the Stem Cell Transplant Recipient and the Hematologic Malignancy Patient[J]. Infect Dis Clin North Am, 2019, 33(2):523-544. DOI:
10.1016/j.idc.2019.02.004
.
Hill JA , Dalai SC , Hong DK , et al. Liquid Biopsy for Invasive Mold Infections in Hematopoietic Cell Transplant Recipients With Pneumonia Through Next-Generation Sequencing of Microbial Cell-Free DNA in Plasma[J]. Clin Infect Dis, 2021, 73(11):e3876-e3883. DOI:
10.1093/cid/ciaa1639
.
Sun T , Liu Y , Cai Y , et al. A Paired Comparison of Plasma and Bronchoalveolar Lavage Fluid for Metagenomic Next-Generation Sequencing in Critically Ill Patients with Suspected Severe Pneumonia[J]. Infect Drug Resist, 2022, 15:4369-4379. DOI:
10.2147/IDR.S374906
.
Hanajiri R , Kobayashi T , Yoshioka K , et al. Central nervous system infection following allogeneic hematopoietic stem cell transplantation[J]. Hematol Oncol Stem Cell Ther, 2017, 10(1):22-28. DOI:
10.1016/j.hemonc.2016.08.008
.
Abidi MZ , Hari P , Chen M , et al. Virus detection in the cerebrospinal fluid of hematopoietic stem cell transplant recipients is associated with poor patient outcomes: a CIBMTR contemporary longitudinal study[J]. Bone Marrow Transplant, 2019, 54(8):1354-1360. DOI:
10.1038/s41409-019-0457-9
.
Liu W , Fan Z , Zhang Y , et al. Metagenomic next-generation sequencing for identifying pathogens in central nervous system complications after allogeneic hematopoietic stem cell transplantation[J]. Bone Marrow Transplant, 2021, 56(8):1978-1983. DOI:
10.1038/s41409-021-01243-8
.
Wang Q , Miao Q , Pan J , et al. The clinical value of metagenomic next-generation sequencing in the microbiological diagnosis of skin and soft tissue infections[J]. Int J Infect Dis, 2020, 100:414-420. DOI:
10.1016/j.ijid.2020.09.007
.
Huoi C , Vanhems P , Nicolle MC , et al. Incidence of hospital-acquired pneumonia, bacteraemia and urinary tract infections in patients with haematological malignancies, 2004-2010: a surveillance-based study[J]. PLoS One, 2013, 8(3):e58121. DOI:
10.1371/journal.pone.0058121
.
Gasiorek M , Hsieh MH , Forster CS . Utility of DNA Next-Generation Sequencing and Expanded Quantitative Urine Culture in Diagnosis and Management of Chronic or Persistent Lower Urinary Tract Symptoms[J]. J Clin Microbiol, 2019, 58(1):e00204-19. DOI:
10.1128/JCM.00204-19
.
Jia K , Huang S , Shen C , et al. Enhancing urinary tract infection diagnosis for negative culture patients with metagenomic next-generation sequencing (mNGS)[J]. Front Cell Infect Microbiol, 2023, 13:1119020. DOI:
10.3389/fcimb.2023.1119020
.
Han D , Li R , Shi J , et al. Liquid biopsy for infectious diseases: a focus on microbial cell-free DNA sequencing[J]. Theranostics, 2020, 10(12):5501-5513. DOI:
10.7150/thno.45554
.
Aguilar YA , Rueda ZV , Maya MA , et al. Is It Possible to Differentiate Pneumocystis jirovecii Pneumonia and Colonization in the Immunocompromised Patients with Pneumonia?[J]. J Fungi (Basel), 2021, 7(12):1036. DOI:
10.3390/jof7121036
.
Mahfouz N , Ferreira I , Beisken S , et al. Large-scale assessment of antimicrobial resistance marker databases for genetic phenotype prediction: a systematic review[J]. J Antimicrob Chemother, 2020, 75(11):3099-3108. DOI:
10.1093/jac/dkaa257
.