血液遗传学专栏
ENGLISH ABSTRACT
RHCE*cE( 281C,282T)等位基因变异献血者4例的血型血清学特征和生物信息学分析
吴凡
庄乃保
孙丽艳
刘通
梁延连
梁爽
作者及单位信息
·
DOI: 10.3760/cma.j.cn511374-20240828-00458
Serological characteristics and bioinformatics analysis of 4 blood donors with RHCE*cE( 281C, 282T) variant allele
Wu Fan
Zhuang Naibao
Sun Liyan
Liu Tong
Liang Yanlian
Liang Shuang
Authors Info & Affiliations
Wu Fan
Shenzhen Blood Center, Shenzhen, Guangzhou 518040, China
Zhuang Naibao
Shenzhen Blood Center, Shenzhen, Guangzhou 518040, China
Sun Liyan
Shenzhen Blood Center, Shenzhen, Guangzhou 518040, China
Liu Tong
Shenzhen Blood Center, Shenzhen, Guangzhou 518040, China
Liang Yanlian
Shenzhen Blood Center, Shenzhen, Guangzhou 518040, China
Liang Shuang
Shenzhen Blood Center, Shenzhen, Guangzhou 518040, China
·
DOI: 10.3760/cma.j.cn511374-20240828-00458
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摘要

目的探讨4例 RHCE*cE( 281C,282T)等位基因变异献血者的血型血清学特征及生物信息学分析结果。

方法选择2022年1月至2023年6月于深圳市血液中心无偿献血且无亲缘关系的4例 RHCE*cE( 281C,282T)等位基因变异无偿献血者(献血者1~4)为研究对象。这4例献血者均为汉族。采集4例献血者肘静脉血5 mL,采用4种不同厂家的单克隆抗体试剂常规血清学检测方法,对其红细胞的C、c、E和e抗原进行鉴定。采用Sanger测序分析4例献血者 RHCE基因编码区及其侧翼区域序列,并采用第3代单分子实时测序(SMRT)技术进行 RHCE基因全长单倍体分析。采用DeepTMHMM软件分析野生型与变异型RhCcEe蛋白跨膜区结构,预测差异氨基酸位置。采用PolyPhen-2、SIFT和Mutation Taster生物信息学软件分析预测检出变异对RhCcEe蛋白质功能的影响。采用Robetta服务器和Swiss-PdbViewer v4.1.0进行RhCcEe蛋白三维结构模型构建,分析野生型与变异型RhCcEe蛋白差异。根据美国医学遗传学与基因组学学会(ACMG)制定的《遗传变异分类标准与指南》(以下简称为"ACMG指南")对检出的变异进行致病性评级。本研究通过了深圳市血液中心医学伦理委员会审查(批准号:SZBCMEC-2022-024)。

结果本研究4例献血者血液样本RhCE血型血清学检测结果显示,其RhCcEe表型均为CCE weake,RhE抗原存在不同程度弱表达或不表达(0~3+)。 RHCE基因测序分析发现,4例献血者 RHCE*cE基因第2外显子存在2处碱基点变异:281T>C和282G>T,该变异导致RhCcEe蛋白第94个氨基酸由亮氨酸(Leu)变异成脯氨酸(Pro),该氨基酸变异位于跨膜区α3链,该变异导致RhCcEe蛋白胞外区表面三维结构发生显著变化。采用PolyPhen-2、SIFT和Mutation Taster生物信息学软件对该变异RhCcEe蛋白功能影响的分析结果显示,预测结果分别为很可能有害、有害和不确定。根据ACMG指南,该变异被评级为可能致病性。

结论该研究首次报道了4例在中国汉族人群中发现 RHCE*cE( 281C,282T)等位基因变异,丰富了该等位基因的血型血清学资料,为临床安全输血提供指导。生物信息学分析有助于进一步研究 RHCE基因变异对蛋白结构和功能的影响。

RHCE基因 ;Rh-Hr血型系统;等位基因;RhCcEe变异型;RhCcEe蛋白;计算机生物学;血型抗原;献血者
ABSTRACT

ObjectiveTo explore the serological characteristics and bioinformatics analysis results of 4 blood donors with RHCE*cE( 281C, 282T) variant allele.

MethodsA total of 4 non-related blood donors with RHCE*cE ( 281C, 282T) variant allele (donors 1-4) were selected as the study objects. They donated blood at Shenzhen Blood Center from January 2022 to June 2023. The 4 blood donors were all Han. And 5 mL elbow venous blood was collected from these 4 blood donors. Regular serological assaying with 4 kinds of monoclonal antibody reagents was used for determination of the RhCcEe type. The nucleotide sequences of all 10 exons and adjacent flanking intron regions of RHCE gene in these 4 donors were analyzed by Sanger sequencing, and the full-length haplotype analysis of RHCE gene was performed by using the single-molecule real-time sequencing (SMRT) third-generation technology. DeepTMHMM software was used to analyze the structure of protein transmembrane region of wild type and variant RhCcEe protein and predict the location of amino acid substitution. The effects of mutations on RhCcEe protein function were analyzed using PolyPhen-2, SIFT and Mutation Taster bioinformatics software. Robetta and Swiss-PdbViewer v4.1.0 were used for modeling the tertiary structures of RhCcEe to analyze the difference between wild type and variant RhCcEe protein. The mutation was rated according to the standards and guidelines for the classification of genetic variants of the American College of Medical Genetics and Genomics (ACMG). This study has been approved by the Medical Ethics Committee of Shenzhen Blood Center (Ethics No. SZBCMEC-2022-024).

ResultsThe RhCcEe phenotypes of the 4 blood donors were CCE weake by serological assaying. The RhE antigen were weakly expressed form 0 to 3+. The analysis of RHCE gene sequence indicated that all the 4 donors with RHCE*cE ( 281C, 282T) allele. The mutation caused the substitution of a single amino acid in the RhCcEe protein (p. Leu94 Pro) and the amino acid substitution was located in the transmembrane α3 chain resulted in significant changes in the 3D structure of the extracellular region of RhCcEe protein. The substitution was predicted to be "Probably damaging", "Damaging" and "Polymorphism" by PolyPhen-2, SIFT and Mutation Taster bioinformatics software. According to the guidelines of ACMG, the variant was rated to be likely pathogenic.

ConclusionThe RHCE*cE ( 281C, 282T) variant allele was first found in the Han Chinese population. The serological data of this allele were enriched. It provides an important guarantee for the safety of blood transfusion. Bioinformatics analysis provided evidences for further study of the structure and functions of RhCcEe protein.

RHCE gene ;Rh-Hr blood-group system;Alleles;RhCcEe variants;RhCcEe protein;Computational biology;Blood group antigens;Blood donor
Liang Shuang, Email: mocdef.3ab617030gnauhsgnail
引用本文

吴凡,庄乃保,孙丽艳,等. RHCE*cE( 281C,282T)等位基因变异献血者4例的血型血清学特征和生物信息学分析 [J]. 中华医学遗传学杂志,2025,42(02):137-144.

DOI:10.3760/cma.j.cn511374-20240828-00458

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Rh血型系统被认为是目前已知的人类血型系统中最复杂、变异性最多的血型系统,特别是其中的D、C、c、E、e抗原的抗原性强,可以导致严重的溶血性输血反应及新生儿溶血病等,在输血治疗中有着重要临床意义。近年,Rh血型系统,尤其是RhD血型的研究已经取得重要突破 [ 1 , 2 , 3 , 4 , 5 ]。然而,关于RhC、c、E、e变异型的发生机制及其在临床输血中的重要作用等,仍然需要进一步探讨。笔者拟对深圳地区无偿献血者中发现的4例 RHCE*cE( 281C,282T)等位基因变异献血者血液样本的血型血清学、分子生物学和蛋白结构进行分析,旨在探索变异型等位基因对表型的影响,为临床安全输血提供指导。现将研究结果报告如下。
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备注信息
A
梁爽,Email: mocdef.3ab617030gnauhsgnail
B

吴凡:生物信息学分析和文章撰写;庄乃保:样本采集和数据分析;孙丽艳:基因分型检测;刘通:血清学检测;梁延连:血清学检测;梁爽:实验设计

C
所有作者均声明不存在利益冲突
D
广东省医学科学技术研究基金项目 (B2023163)
深圳市医学重点学科建设经费资助 (SZXK070)
深圳市医疗卫生三名工程项目 (SZSM202311032)
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